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No. of matching species/subspecies etc: 91 | Id | No. of basepairs | 16S rRNA ACC-No | rRNA op. | Updated |
---|---|---|---|---|---|
Actinobacillus pleuropneumoniae | 57 | 2 274 482 | AF224283 | 9 | 2021-06-29 |
Aeromonas hydrophila subsp. hydrophila | 86 | 4 744 448 | X87271 | 10 | 2023-03-29 |
Aeromonas salmonicida subsp. salmonicida | 87 | 4 702 402 | X74681 | 9 | 2023-03-29 |
Anaplasma phagocytophilum | 45 | 1 471 282 | AF172164 | 1 | 2024-11-18 |
Arcobacter skirrowii | 250 | L14625 | 2023-03-22 | ||
Bacillus cereus | 21 | 5 300 915 | AE016877 | 13 | 2023-03-08 |
Bartonella elizabethae | 197 | L01260 | 2023-03-22 | ||
Bibersteinia trehalosi | 127 | AY362927 | 2024-11-20 | ||
Bordetella bronchiseptica | 53 | 5 339 179 | AJ278452 | 3 | 2024-10-27 |
Bordetella pertussis | 55 | 4 086 189 | U04950 | 3 | 2023-03-22 |
Brachyspira aalborgi | 161 | Z22781 | 2023-03-08 | ||
Brachyspira alvinipulli | 131 | EF455559 | 2023-03-08 | ||
Brachyspira hyodysenteriae | 97 | 3 036 634 | U14930 | 1 | 2023-03-08 |
Brachyspira innocens | 232 | NR_044763 | 2023-03-08 | ||
Brachyspira intermedia | 132 | 3 304 788 | U23033 | 1 | 2023-03-08 |
Brachyspira pilosicoli | 98 | 2 586 443 | U14927 | 1 | 2023-03-08 |
Brachyspira suanatina | 140 | DQ473576 | 2023-03-08 | ||
Campylobacter hyointestinalis subsp. hyointestinalis | 247 | AF097689 | 2023-03-22 | ||
Campylobacter hyointestinalis subsp. lawsonii | 248 | AF097685 | 2023-03-22 | ||
Clostridium botulinum, group I | 202 | 3 863 450 | L37585 | 8 | 2023-03-08 |
Clostridium botulinum, group II | 203 | 3 659 644 | L37592 | 11 | 2023-03-08 |
Clostridium botulinum, group III | 24 | 2 773 157 | L37590 | 10 | 2023-03-08 |
Clostridium botulinum, group IV | 204 | X68316 | 2023-03-08 | ||
Clostridium chauvoei | 25 | U51843 | 2023-03-08 | ||
Clostridium colinum | 259 | X76748 | 2023-03-08 | ||
Clostridium haemolyticum | 162 | AB037910 | 2023-03-08 | ||
Clostridium perfringens | 29 | 3 031 430 | AB075767 | 10 | 2023-08-14 |
Clostridium piliforme | 28 | L07416 | 2023-03-08 | ||
Clostridium septicum | 30 | U59278 | 2023-03-08 | ||
Clostridium tetani | 32 | 2 799 251 | X74770 | 6 | 2023-03-08 |
Clostridium tyrobutyricum | 262 | 2023-03-08 | |||
Corynebacterium kutscheri | 169 | D37802 | 2023-03-02 | ||
Corynebacterium ulcerans | 212 | 2 502 095 | X84256 | 4 | 2023-03-02 |
Dermatophilus congolensis | 126 | AJ243918 | 2023-03-02 | ||
Ehrlichia canis | 181 | 1 315 030 | M73221 | 1 | 2023-03-22 |
Ehrlichia ruminantium | 112 | 1 499 920 | X61659 | 1 | 2023-03-22 |
Enterococcus cecorum | 276 | 2 421 598 | NR_024905 | 2023-03-08 | |
Erysipelothrix rhusiopathiae | 43 | 1 787 941 | AB034200 | 7 | 2023-09-25 |
Erysipelothrix tonsillarum | 227 | AB055906 | 2024-10-09 | ||
Escherichia coli | 68 | 4 646 332 | X80725 | 7 | 2023-10-19 |
Fusobacterium necrophorum subsp. necrophorum | 103 | AJ867039 | 2023-10-19 | ||
Fusobacterium necrophorum subsp. funduliforme | 153 | EF447425 | 2023-03-15 | ||
Gallibacterium anatis | 176 | AF228001 | 2023-03-29 | ||
Helcococcus ovis | 278 | Y16279 | 2023-03-08 | ||
Lawsonia intracellularis | 108 | 1 457 619 | U30147 | 2 | 2023-03-22 |
Listeria ivanovii subsp. ivanovii | 168 | 2 928 879 | AJ549930 | 6 | 2024-10-21 |
Listeria monocytogenes | 13 | 2 944 528 | X56153 | 6 | 2024-10-21 |
Listonella anguillarum | 85 | X16895 | 2023-03-29 | ||
Mannheimia haemolytica | 60 | 2 681 844 | AF060699 | 6 | 2024-10-23 |
Mannheimia varigena | 200 | 2 228 291 | AF053893 | 6 | 2024-10-23 |
Moraxella bovis | 67 | 2 000 000 | AF005183 | 2024-10-22 | |
Mycobacterium leprae | 7 | 3 268 203 | X55587 | 1 | 2023-03-02 |
Neorickettsia risticii | 165 | 879 977 | M21290 | 1 | 2023-03-22 |
Paenibacillus larvae | 179 | 4 046 337 | X60619 | 8 | 2023-03-08 |
Paeniclostridium sordellii | 31 | AB075771 | 2023-03-08 | ||
Peptoniphilus indolicus | 158 | D14147 | 2023-03-08 | ||
Prevotella melaninogenica | 164 | L16469 | 2023-03-15 | ||
Pseudomonas aeruginosa | 65 | 6 264 403 | Z76651 | 4 | 2024-11-19 |
Pseudomonas fluorescens | 268 | 6 511 547 | FJ972536 | 2023-03-29 | |
Rickettsia helvetica | 228 | 1 369 927 | CM001467 (region 522930-524428) | 1 | 2023-03-22 |
Rickettsia prowazekii | 146 | 1 111 523 | AJ235272 | 1 | 2023-03-22 |
Rickettsia rickettsii | 44 | 1 257 710 | L36217 | 1 | 2023-03-22 |
Riemerella anatipestifer | 175 | 2 155 121 | U60101 | 3 | 2023-03-15 |
Staphylococcus aureus subsp. anaerobius | 185 | D83355 | 2023-03-08 | ||
Staphylococcus aureus subsp. aureus | 20 | 2 809 422 | D83357 | 6 | 2023-03-08 |
Staphylococcus epidermidis | 205 | 2 499 279 | D83363 | 5 | 2023-03-08 |
Staphylococcus felis | 122 | D83364 | 2023-03-08 | ||
Staphylococcus intermedius | 22 | D83369 | 2023-03-08 | ||
Staphylococcus pseudintermedius | 135 | 2 572 216 | AJ780976 | 5 | 2023-03-08 |
Staphylococcus schleiferi subsp. coagulans | 189 | AB009945 | 2023-03-08 | ||
Staphylococcus schleiferi subsp. schleiferi | 226 | 2 528 396 | S83568 | 5 | 2023-03-08 |
Streptococcus agalactiae | 16 | 2 211 485 | AB002479 | 7 | 2023-03-08 |
Streptococcus canis | 207 | DQ303184 | 2024-06-12 | ||
Streptococcus devriesei | 182 | AJ564067 | 2023-03-08 | ||
Streptococcus dysgalactiae subsp. equisimilis | 121 | 2 106 340 | AJ319643 | 5 | 2023-08-11 |
Streptococcus dysgalactiae subsp. dysgalactiae | 17 | AY584478 | 2023-03-08 | ||
Streptococcus equi subsp. equi | 14 | 2 253 793 | EF406032 | 6 | 2023-03-08 |
Streptococcus equi subsp. ruminatorum | 191 | AJ605748 | 2023-03-08 | ||
Streptococcus equi subsp. zooepidemicus | 15 | 2 024 171 | EF406034 | 5 | 2023-03-08 |
Streptococcus pneumoniae | 145 | 2 046 115 | AF003930 | 4 | 2023-03-08 |
Streptococcus porcinus | 148 | X58315 | 2023-03-08 | ||
Streptococcus pyogenes | 18 | 1 899 877 | AB002521 | 6 | 2023-03-08 |
Streptococcus suis | 147 | 2 100 000 | AB002525 | 4 | 2023-03-08 |
Streptococcus uberis | 19 | 1 852 352 | AB002526 | 5 | 2023-03-08 |
Treponema pallidum subsp. pallidum | 100 | 1 138 011 | M88726 | 2 | 2023-03-08 |
Treponema paraluiscuniculi | 134 | 1 133 390 | JX120546 | 2 | 2023-03-08 |
Treponema pedis | 188 | 2 889 325 | EF061268 | 2 | 2023-03-08 |
Treponema phagedenis | 139 | DQ470655 | 2023-03-08 | ||
Trueperella pyogenes | 1 | 2 295 822 | X79225 | 6 | 2023-03-02 |
Vibrio vulnificus | 84 | 5 211 578 | X74726 | 9 | 2023-03-29 |
Yersinia ruckeri | 80 | AF366385 | 2023-03-29 |